PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62043180-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 253aa    MW: 27494.9 Da    PI: 6.514
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62043180-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.81.7e-072302355
                    HHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 23 LrellPkaskapskKlsKaeiLekAveYIksLq 55
                    Lrel+P++    ++K +Ka+ L +++eYI++Lq
  AUR62043180-RA  2 LRELIPHS----DQKRDKASFLLEVIEYIHYLQ 30
                    9******9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MLRELIPHSD QKRDKASFLL EVIEYIHYLQ EKVNRYEGAY PGWNSEPPKL NPLRNSHGAT  60
ESFVDQSQAV NASPVLMFGA KVDEKATPAL ISSLEKLIKQ DQFLHHCSMI STLLSLIASC  120
AVAPPPVRLP TEGGNASFPQ LQLWQGRNFA SEPSLATDKL KDQELAREGG TINISSVVEY  180
ANTSLPSSGV DLSQASISVQ VDIGKRAHNR QDSQEAAGKG VEIPSGNPSL QHARVDSTSN  240
EFDHAVKRLK TG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.19e-41bHLH family protein