PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62043211-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 139aa    MW: 15548 Da    PI: 11.0671
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62043211-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.88e-084283854
                    HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    + r RR+ri ++   L++l+P       +K++ a++L +A++Y+k L
  AUR62043211-RA 42 AARHRRERISERVRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 83
                    5699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MAAMREMIFR IAAMQPIYID PESVKLPKRR NVRISKDPQS VAARHRRERI SERVRILQRL  60
VPGGTKMDTA SMLDEAIHYV KFLKNQVQSL ERAAVNNHRP IPASTGLGFP VAVASGGNGY  120
HQVHMNVATH NVQHYLDA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.11e-46bHLH family protein