PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62043402-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WOX

Protein Properties

Length: 243aa MW: 25987.1 Da PI: 7.0825

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62043402-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.4	5e-08	4	40	25	57
--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 25 psaeereeLAkkl....gLterqVkvWFqNrRakekk 57 p +ee ++ k l + +++V++WFqNrR + ++ AUR62043402-RA 4 PPKEETVRIRKLLekfgAVGDANVFYWFQNRRSRSRR 40 555666666666666678899*************997 PP
2	Wus_type_Homeobox	62.5	8.8e-21	1	42	24	65
Wus_type_Homeobox 24 lrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++P+kee+ ri++ Le++G+++d+NVfyWFQNr++R+r++q AUR62043402-RA 1 MVNPPKEETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQ 42 78**************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MVNPPKEETV RIRKLLEKFG AVGDANVFYW FQNRRSRSRR RQRQLQASLA ASVTPVGSQT 60 PPPPPVSMNL GLLGGGGGSS SSLYDFGHHH HHHHQNSIIS TCTTQASSSV TCFSPSNTST 120 SSTNFGDCGG VVDDAFGNYS GQMGLINSNH HLDCPSSSPN LEFQSGIITV FLNGVATQVP 180 DGALDMKAMF GEEVILVHSS GVPVPFNEYG ISLQSLQHGE SYFLVCASSL LLLRCCPNAY 240 VN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	4e-26	WOX family protein