PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62043517-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 259aa    MW: 29454.5 Da    PI: 4.4353
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62043517-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1271.5e-081111664790
            FAR1  47 k............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     k            ++++ r+ + tr +Cka+++ k +k+g++ev   + +HnHel+
  AUR62043517-RA 111 KlvemvdeedvnvKTRKPRQVSITRSNCKACIRAKVNKEGQFEVVAHVIQHNHELT 166
                     04445555666556778888899*******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MENSTFDTTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA  60
DEAIDNADEA IENAEDAIHN AENQVVPDKS IDSNSEQTTK SDATEGQKKT KLVEMVDEED  120
VNVKTRKPRQ VSITRSNCKA CIRAKVNKEG QFEVVAHVIQ HNHELTKPQW HYLHRSERKM  180
TEEKVVTIKT MKSSGLTTMD TYNYMATEAG GEQNIGHSVV DHLNFCSRLR MEQIEAGDAQ  240
TLVNILSQEQ SEDPNFFF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-17FAR1 family protein