PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62043574-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 673aa MW: 76208.2 Da PI: 6.783

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62043574-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	48.1	3.7e-15	29	98	24	90
FAR1 24 rngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 + +t+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k++ +w+vt ++++HnHel AUR62043574-RA 29 VGRGVTRRDFTCHRGGHPQAKPSEEGKLQRNRKSSRCGCQAYMRIVKRSdldVPEWRVTGFSNNHNHELL 98 445699****************99**************99998676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MLPMNFIAAL PSNVAFPSGR HRTRGKDGVG RGVTRRDFTC HRGGHPQAKP SEEGKLQRNR 60 KSSRCGCQAY MRIVKRSDLD VPEWRVTGFS NNHNHELLKS VEAQIPPSHC TISADDKSRI 120 CMFAKAGMSA RQMLRLMELE KGVKLGCLPF TELHIRDLLQ SFRHVDKDND AIDLISMYGH 180 NRLEHIAWSY PSSIQKYEAF GDAILLDTNH RLDAYDMLLG LLIGVDNHGK ACLYSCVLLR 240 DENLESFTWA LKTFLCFMKG KAPQTILTDQ NMWLKEAITC EMPETKHAFS IWHIIANLSD 300 WFSLPLGSHY DGWKTEFYRL YSLEMVDEFE AEWKEMVDRY ELQSNKHIIC LYALRDFWAL 360 SFLRRYFFAG LMSRSVTDSI NALIQRILSV ADIAEYDDHG GSKLKMQQNE KVSLKTGSPM 420 ESHAATVFTP FAFSLLQEEL VSAPQYASIM VGEGCFQIRH HTEMDGGCKV MWDPSQELIH 480 CSCHQFEFLG ILCRHILRVL STNNCFRIPD PYLPLRWRLV SNEHVEKEQT EKVKFLEAIA 540 STIVSESVVT EERLTFACEH MSMVLAHIKQ LPKLNNHNEA NEMGINSSTG SLIIPGVEAS 600 DSIAQSFALG NPHESFLVKL KETNPNPGLD NNMSGKRRRA IPCEQYAHAA CDSAIIEGNS 660 VHADGDAFCG FL*

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MLPMNFIAAL PSNVAFPSGR HRTRGKDGVG RGVTRRDFTC HRGGHPQAKP SEEGKLQRNR  60
KSSRCGCQAY MRIVKRSDLD VPEWRVTGFS NNHNHELLKS VEAQIPPSHC TISADDKSRI  120
CMFAKAGMSA RQMLRLMELE KGVKLGCLPF TELHIRDLLQ SFRHVDKDND AIDLISMYGH  180
NRLEHIAWSY PSSIQKYEAF GDAILLDTNH RLDAYDMLLG LLIGVDNHGK ACLYSCVLLR  240
DENLESFTWA LKTFLCFMKG KAPQTILTDQ NMWLKEAITC EMPETKHAFS IWHIIANLSD  300
WFSLPLGSHY DGWKTEFYRL YSLEMVDEFE AEWKEMVDRY ELQSNKHIIC LYALRDFWAL  360
SFLRRYFFAG LMSRSVTDSI NALIQRILSV ADIAEYDDHG GSKLKMQQNE KVSLKTGSPM  420
ESHAATVFTP FAFSLLQEEL VSAPQYASIM VGEGCFQIRH HTEMDGGCKV MWDPSQELIH  480
CSCHQFEFLG ILCRHILRVL STNNCFRIPD PYLPLRWRLV SNEHVEKEQT EKVKFLEAIA  540
STIVSESVVT EERLTFACEH MSMVLAHIKQ LPKLNNHNEA NEMGINSSTG SLIIPGVEAS  600
DSIAQSFALG NPHESFLVKL KETNPNPGLD NNMSGKRRRA IPCEQYAHAA CDSAIIEGNS  660
VHADGDAFCG FL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein