PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62043582-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 223aa    MW: 24949.8 Da    PI: 6.5209
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62043582-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.74.3e-13160205655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L++l+P+     +k  + a++L +Av+YIk+Lq
  AUR62043582-RA 160 SIAERVRRTRISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKDLQ 205
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MTGYGMMGGM GSYGGSNVQV NYSSGQPSST SELVNQNSDV GAKRLRMNSL DETKFSNSSN  60
NPNDDSNYDF PMNSWDDSIL SENFSGLDRV ADEDIKVFPE LNASENQSGE IKNRPPPLTH  120
HLSLPKTLPE LSNMEKFLQF QDSTPLRIRA KRGCATHPRS IAERVRRTRI SERMRKLQDL  180
VPNMDKQTNT ADMLDLAVDY IKDLQKHVEN LADNRAKCTC SR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-59bHLH family protein