PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62043707-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 158aa    MW: 18552.7 Da    PI: 7.8851
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62043707-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.81.9e-08114154954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P        K++ a++L +A++Y+k L
  AUR62043707-RA 114 ARHRRERISEKIRILQRLVPGG-----VKMDTASMLDEAIRYVKFL 154
                     699*****************96.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MLMIIINIIT IMFIHLYMII NPVWQTYHNL PTPHSSQPSI PSSSYIINQT NTLQEQIILE  60
EDEHEFEEEE ELGAMKEMMY RIAVMQPVDI DPAAIRKPKR RNVRISNDPQ SVAARHRRER  120
ISEKIRILQR LVPGGVKMDT ASMLDEAIRY VKFLKRQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.11e-45bHLH family protein