PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62043760-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family YABBY
Protein Properties Length: 118aa    MW: 13263.1 Da    PI: 11.2182
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62043760-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY114.91.4e-35158691163
           YABBY  91 sastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163
                      as++++  + s+  ++e+pr+p ++rPPekrqrvPsaynrfikeeiqrika+nPdishreafsaaakn a +
  AUR62043760-RA  15 GASSYMN-PSSSRGGSNELPRAPTTNRPPEKRQRVPSAYNRFIKEEIQRIKAENPDISHREAFSAAAKNLARL 86 
                     3333322.233788899****************************************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MPNQAPNFSL TQSNGASSYM NPSSSRGGSN ELPRAPTTNR PPEKRQRVPS AYNRFIKEEI  60
QRIKAENPDI SHREAFSAAA KNLARLLLLY VLHKIESPSL SLMNVIRWVI NFDIRSR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-24YABBY family protein