PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62044304-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Trihelix
Protein Properties Length: 191aa    MW: 21759.3 Da    PI: 4.8464
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62044304-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix38.62.9e-122393471
        trihelix 34 vskkmrergferspkqCkekwenlnkrykkikegekkr 71
                    +s +++++g++r+p qCk++w+nl ++++k+k++e+k 
  AUR62044304-RA  2 ISCYCKQQGVKRGPAQCKKRWSNLIGDFRKVKNWESKM 39
                    899********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MISCYCKQQG VKRGPAQCKK RWSNLIGDFR KVKNWESKME GGDDDEVDEE DEKMQDGAEV  60
LSEIKNKVQE TLAITGKLDD VKSADNVTEE PVKNFCIQEP ISESRPNFSN EDSQGKGKRQ  120
RLSTDECKAN CSEEQLLKVL EENNRLLNAQ LESHNKNCQL EREQRKQNYN ELMSTLSKLT  180
DVLSKIAEKL *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1116121KGKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.16e-26Trihelix family protein