PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62044392-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NF-YB

Protein Properties

Length: 140aa MW: 15453.4 Da PI: 4.1528

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62044392-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	40.2	8.4e-13	18	64	39	85
NF-YB 39 vsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 efi +v+se++d c+re+++ti+++ +l al lGf +y+e + + AUR62044392-RA 18 PKEFINLVSSESNDVCNREEKRTIAPEHVLKALEVLGFGEYIEDVYA 64 47****************************************99865 PP

Sequence ? help Back to Top
Protein Sequence Length: 140 aa Download sequence
MMEPMDIVGK AKEDASLPKE FINLVSSESN DVCNREEKRT IAPEHVLKAL EVLGFGEYIE 60 DVYAAYEQHK VETMVILLFQ VNFKDCTDPG GLSGLWGNAA EMTEEEAAAE QQRMFAEARA 120 RMNGNVPLPK SDTDPTPES*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23090.3	7e-41	NF-YB family protein