PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62044420-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 321aa    MW: 36752 Da    PI: 5.0398
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62044420-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR160.74.6e-19102204290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 
                      Y+++A  +GFs+rk++++ +++++ +t++++vCs egkr++ +kk              ++++ r+ + tr +Cka+++ k +k+g++ev   +
  AUR62044420-RA 102 LYEKHAAILGFSIRKHTTRFKQHTKIVTEKNYVCSAEGKRHSGQKKtklvemvdeedvnvKTRKPRQVSITRSNCKACIRAKVNKEGQFEVVAHV 196
                     7*****************************************99999***********887888888899************************* PP

            FAR1  83 leHnHela 90 
                      +HnHel+
  AUR62044420-RA 197 IQHNHELT 204
                     ******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MEEREKEEET NCFGDEFVPI FNNPDNADEA IDNADEAIEN AEDAIHIAEN QVVPDKSIDS  60
NSEQTTKSDA TEDTNPIDAY GLDLTGSFVG VVKETFEEIL ELYEKHAAIL GFSIRKHTTR  120
FKQHTKIVTE KNYVCSAEGK RHSGQKKTKL VEMVDEEDVN VKTRKPRQVS ITRSNCKACI  180
RAKVNKEGQF EVVAHVIQHN HELTKPQWHY LHRSERKMTE EKVVTIKTMK SSSLTTMDTY  240
NYMATEAGGE QNIGHSVVDH LNFCSRLRME QIEAEDAQTL VNILSQEQSE DPNFFFRVKF  300
DKEGRICNIF LERFNDARRI *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-23FAR1 family protein