PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62044438-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 402aa    MW: 44264.2 Da    PI: 6.8392
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62044438-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA40.63.5e-136493128
            GATA  1 CsnCgttk..TplWRrgpdgnktLCnaCGl 28
                    C++Cg ++  Tp +Rrgp g++tLCnaCGl
  AUR62044438-RA 64 CQHCGISEndTPAMRRGPAGPRTLCNACGL 93
                    ******999********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MFGNKTVSLP NSYGYAVVLP VGLMHRKNGQ FASLREGSAS FNLEAKKNLV VGRSLGPETV  60
SNKCQHCGIS ENDTPAMRRG PAGPRTLCNA CGLILEARWF ENGPGTSFVN LSYLPAILNS  120
SCLHKHSYLA DVSRQNTGTH IVHNSYPVSP AVNIEQICKV WLDQIEYCHV NTRLAHVTCG  180
HFVKTTASGS VECEFCCCNC ETKTRCTFHV KIIVADDSGK VFAWCIGQNA IELLQISPDE  240
FYELPEEEQV IYPCSLENER YMIAIVNCGQ QETIFKECVT AENEMKLFLV RGEGAAAGLR  300
LPLQSLVASA ALFAPLRWLL LIWLRHCGGC NCFCCAITVA IATFFVAPLR WLPLFSREDG  360
WFGVGSGPAK LVETRIQLIL KLGVAVPPDK NPDVDALLEF LI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.27e-14GATA family protein