PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62044493-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 281aa    MW: 31815.4 Da    PI: 7.7493
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62044493-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000124466123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  AUR62044493-RA 44 YSCSFCRREFKSAQALGGHMNVH 66
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDEARCWMVP DRAPKYDDES WEEKAFAEDA AGMFGGCVWP PRSYSCSFCR REFKSAQALG  60
GHMNVHRRDR ARLKQFSSSQ HQDRRVDPPR NSSYPNHPNN SGLSLVSRKS PCTTEEDNIK  120
DAASPNFTSQ SSVVSLHQTT ISTPRSQLVS SLVISHEKNI AFCLNHDQKF TDLPYVKSID  180
QEKPDLAFFC CSSNERSKDL SNKISTTQEK PSSFIRLSYS ATVEDNSDEP NRSKKRKIDK  240
FSPPAVNNLD KFEEQAPKVY ASKFEYLDLE LRLGDSPKVQ *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.16e-29C2H2 family protein