PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62044764-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family TCP
Protein Properties Length: 193aa    MW: 21647 Da    PI: 8.6656
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62044764-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP114.21.7e-3586183197
             TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksa 94 
                     aagkkdrh ki T++g RdRRvRls+++a++fF Lqd+LGfdk+skt+ WLl+ +k+ai+el++ts+ ++  + ++++ ++ ++++  +++++++
  AUR62044764-RA  86 AAGKKDRHTKITTAQGVRDRRVRLSMSIAREFFNLQDMLGFDKASKTLGWLLTHSKAAIDELASTSNLKPPVTpDDNEVVVINDQEYCTSNNNDD 180
                     699**************************************************************555443332222222222211111111111 PP

             TCP  95 aks 97 
                     +ks
  AUR62044764-RA 181 EKS 183
                     111 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MFSSNNNNNS YPLFYDQSPS FFTNRAIPES NNIFLFQHYY GKFLPPTSYP PISDNSIVNL  60
SSEPSINQQN GLLCPSNVRV SSSRRAAGKK DRHTKITTAQ GVRDRRVRLS MSIAREFFNL  120
QDMLGFDKAS KTLGWLLTHS KAAIDELAST SNLKPPVTPD DNEVVVINDQ EYCTSNNNDD  180
EKSSSKRERG EK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.23e-28TCP family protein