PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0008s0010.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family NF-YB
Protein Properties Length: 138aa    MW: 15080.2 Da    PI: 4.7096
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0008s0010.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB56.47e-18392392
                NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92
                         +q+  lP a + ++mk + Pa+ ++++da  ++  c  ef+ +++sea++ c++e+++ ++++ +l al tlGf   + +++  l+ +++
  Bobra.0008s0010.1.p  3 DQEVGLPRATILKMMKDAAPAELRLANDAVSLIGLCCNEFVQLISSEATELCEKENKHVLQPEHVLRALDTLGFSAMLPEVQRALEGWQD 92
                         78889***********************************************************************99999998888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MDDQEVGLPR ATILKMMKDA APAELRLAND AVSLIGLCCN EFVQLISSEA TELCEKENKH  60
VLQPEHVLRA LDTLGFSAML PEVQRALEGW QDSNKGVQRI GKRKTKAEEA GLSEAEQIAL  120
QQKLFAEARA SSTFAEL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.42e-29NF-YB family protein