PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0010s0006.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family AP2
Protein Properties Length: 200aa    MW: 22140.9 Da    PI: 6.507
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0010s0006.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2232e-0719541050
                  AP2 10 kkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaar 50
                         k ++rW A I++      + kr  +g+f ++eeAa+ +++++
  Bobra.0010s0006.1.p 19 KANKRWKALIKV------NgKRKEVGSFNSEEEAARCYDRFA 54
                         6789********......44********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MEQQVCHDNG FSRFTGLAKA NKRWKALIKV NGKRKEVGSF NSEEEAARCY DRFAVLAWGV  60
RAKTNFNMLS LLCDVGKEAR LVLETAMEGS KAKQNRCHGA ARSFMDKWYE GMAHTTHVNN  120
REDAGPSFST EQDQRHRDRG CDGLGMLPPL QHTDGPLADD EVEKAGLLLS LLADGIQEPT  180
YALDDTYTFS PARCSLPEG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.23e-07ERF family protein