PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0010s0007.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family ERF
Protein Properties Length: 190aa    MW: 20916.4 Da    PI: 5.2354
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0010s0007.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.52.6e-1187133253
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                           ++GV+   kr+ W+A I++      +  ++++g+f t++eAa+a++  + ++
  Bobra.0010s0007.1.p  87 LFRGVSKSGKRKPWRAMIQH------NhEQHHIGYFETPQEAARAYDLKAIQY 133
                          69****9999999*******......44*******************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MELDDATLCL LDLACDRATT MAFDRYGSTE ELTVEDDLDR TLQGFHGAVT SFIDAGDAAE  60
ALTSLQGCQP TSTSRERPSG MGRGTSLFRG VSKSGKRKPW RAMIQHNHEQ HHIGYFETPQ  120
EAARAYDLKA IQYMGPTAPT NFPLTDYESH LKIPSGPPIL SQGPGSDTEE VCLFHIPFHI  180
RSQAFVWVQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-12AP2 family protein