PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0011s0006.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family C2H2
Protein Properties Length: 462aa    MW: 51642.8 Da    PI: 6.8161
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0011s0006.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H225.63e-083558123
                         EEETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
                         y+C+dCg+s++r+ +L +H r+ H
  Bobra.0011s0006.1.p 35 YRCGDCGRSYRRPKSLATHRRRvH 58
                         9********************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    
MSFVTRSNLI FLILMMSSSP RCLQQTSKKS SKPTYRCGDC GRSYRRPKSL ATHRRRVHNR  60
MPAQQEDNAG VPGFDMADLD GGSDMRNHNL DPSSPVWPLA TDNAEFMLRD HPPGSNSRPS  120
NGWASSSESE ECSDSEQSLT DSQSGRYDWD DEIEHELQED GPAEDADDAQ DGDADGRGSP  180
SSPDSSDSEG WEPMEGVQGR SPALPDIYKE NNRITAAFLK KHLNQPTYPG GNETIREAVY  240
SMLEMKMKHK LTDAALDDTC RMNRLRKVPQ PNLHPSSLHM CLKVAECRDY RSTMRHVCSN  300
GCVMFPTLRP SEYGRHTEDA CPECGSKRLR EVKSGMKTTL RLARVVYVLG VGHAIRQLFN  360
DAEFCKLRGS GRDVEGDYYE SVEAARLHRA AQADIGDVCT SVYELGFDFF QIYTNRQHSI  420
GLLTLRCLDI PSLHRSKLKF TKVIAVISGP KEPHLIKGGR Y*