PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0014s0080.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family E2F/DP
Protein Properties Length: 140aa    MW: 15382.5 Da    PI: 11.5338
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0014s0080.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP46.65.5e-151877249
              E2F_TDP  2 keksLrlltqkflklleksee.givtlnevakeLvse..............dvknkrRRiYDi 49
                         ++k+Lr++++k   ++ek+e+ g++t+neva+eLv e                kn+rRR+YD+
  Bobra.0014s0080.1.p 18 TGKGLRHFSMK---VCEKVESkGRTTYNEVADELVIEfsqpdaeataggstTRKNIRRRVYDA 77
                         689********...*****999****************************9999********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MAATPPSVDL GGGGARQTGK GLRHFSMKVC EKVESKGRTT YNEVADELVI EFSQPDAEAT  60
AGGSTTRKNI RRRVYDAPER AEWPWTSSAR RRRTFPGRGC PCQLAARWPP SASRSRSWSR  120
RLPNSMATSR LAMLPLSVF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17193RRRVYDAPERAEWPWTSSARRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-23E2F/DP family protein