PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0022s0110.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family B3
Protein Properties Length: 252aa    MW: 28646.4 Da    PI: 8.8035
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0022s0110.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.52.8e-141181823496
                          SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                   B3  34 ktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                            + l+d +g++Wev + y  ++ +++  ++kGW+ F k  g+ +gD+vvF++ g+++fel+++v
  Bobra.0022s0110.1.p 118 HNIYLRDDDGKTWEVLYEYyiKNLKRHLEFRKGWRAFTKHRGVVVGDSVVFERWGENRFELKIRV 182
                          4699*************998777777789***********************8888999999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MSLSTVLTNS FNTVELQGYG PSSYGYGPSQ GGEVLQLSPA DLARYLSLIV QPPARTTPLE  60
IFTVSINNKL YLQRLNVRRY MVKELLPLVI GRAGNPIGSA GDPMDVPLTD KNETIFKHNI  120
YLRDDDGKTW EVLYEYYIKN LKRHLEFRKG WRAFTKHRGV VVGDSVVFER WGENRFELKI  180
RVKKGVENAD QPAEGKKRSA KGKEREAQTP PQSEEEEEEE ELAEEGSQNP ENSKKKRRRV  240
VKVQEACPES Y*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1234239KKKRRR
2236240KRRRV