PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0022s0164.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family E2F/DP
Protein Properties Length: 342aa    MW: 37308.9 Da    PI: 4.6837
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0022s0164.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP886.6e-2841106171
              E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                          r+++sL+llt+kf++l+e++e+g+++ln +a++L   +v  ++RRiYDi+NVLe+++liekk+kn+i+wkg
  Bobra.0022s0164.1.p  41 RYDSSLGLLTKKFVSLVESAEDGVLDLNRAADAL---SV--QKRRIYDITNVLEGIGLIEKKSKNNIKWKG 106
                          6899******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MADLENPDSV RRRRPNARNH VARSPTRTAE TPRGGGGTNC RYDSSLGLLT KKFVSLVESA  60
EDGVLDLNRA ADALSVQKRR IYDITNVLEG IGLIEKKSKN NIKWKGGTSG SFEEPQLELQ  120
QLTEEIKQLQ AEYDRLEELT DMAKSRIEAM SSHPANKSRI YVTSAEILQL KSVGTDTVFA  180
VTAPQGTTLS VPNPQEVPEG FRYKAELRSV CEPIEVWLVS KPKENGLEAG VEVGSPAPAT  240
PQTVPAFRNL AEAPVTLPDV TQPSIPQKEP STPNNAKPED GSIFVSGSRQ GVYTLMSGLM  300
SPISPGGFMR LEAVDVDQLW YETEDTQLGV ADIFRDDPTL E*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.39e-55E2F/DP family protein