PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0022s0187.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family C2H2
Protein Properties Length: 432aa    MW: 47730 Da    PI: 6.9078
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0022s0187.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.89.2e-06426223
                         EETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2  2 kCpdCgksFsrksnLkrHirt.H 23
                         +C+ C k F+ + +L+rH+++ H
  Bobra.0022s0187.1.p  4 QCSVCFKEFRKPGSLRRHQMRrH 26
                         8*******************989 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MTLQCSVCFK EFRKPGSLRR HQMRRHPAPP GSVVEVSEIR PAPVQSDADP SAFFDMDTPP  60
PSHQNMWDLE LAQQIQPSEF PGLDMEFRAA TPEHEAQSSI TSPAPVQSRA TPNLWGAGIQ  120
SPLQSPGGGD WTPEASPMST SSRSLSETLH IYNTRRLTAE FLKSNIELPT FHGGHETVRQ  180
AVYSMLELKY KHGETDACLE DICRLMHHCK LPRPNIHPPS LHLCMRVAEC RDFKATMKHV  240
CGGGCTAFST LDPSDYANHL QDTCIECGGL RIVQEKLGVK TNLRPARVVY DLGVGNAIQQ  300
LFHDEEFCKM RGTGRDTQGD YYQSPEASRL HAAAMADIKD KDTSVYELGM DYFQPFQNSN  360
YSVGLVIIRC LDIPALQRSK LRFSQVVAVI SGPREPQLIK GCISGCTGAT NMADRQHSSG  420
HTKEGSGPHF P*