PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0036s0014.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family ERF
Protein Properties Length: 233aa    MW: 26098.5 Da    PI: 4.7353
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0036s0014.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.72.1e-1159119255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpse.ng.......krkrfslgkfgtaeeAakaaiaarkkleg 55 
                          +ykGV+ +  +g++ AeIrd +   g        + r +lg+f ta+eAa a++aa+++++g
  Bobra.0036s0014.1.p  59 KYKGVHARD-NGKFGAEIRDHTGkLGledakgkLKPRPWLGTFKTAKEAALAYDAAARRIYG 119
                          8*****999.8*********655555667754444899*********************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MHRRCPRERG DGHARSRSRS RSRSRSRSRS RSRSSTLAAR ALVTTASPAS PNQMDLPVKY  60
KGVHARDNGK FGAEIRDHTG KLGLEDAKGK LKPRPWLGTF KTAKEAALAY DAAARRIYGA  120
RAICNFPQDD RDDEEEAEEE EAEEEEEEEE EEEEEEEEEE EEEEEEEEED PSVVAAAKTL  180
VQLASDKHGN SYQRPSNILT STVEKCCGAA PYMMHGHFFC VVIEQRTSGQ LA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11523RSRSRSRSR
21525RSRSRSRSRSR
31725RSRSRSRSR
41727RSRSRSRSRSR
51927RSRSRSRSR
61929RSRSRSRSRSR
72129RSRSRSRSR
82131RSRSRSRSRSR
92331RSRSRSRSR
102333RSRSRSRSRSR
112533RSRSRSRSR