PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0038s0078.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family ERF
Protein Properties Length: 227aa    MW: 25177.8 Da    PI: 11.0015
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0038s0078.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.81.3e-08107146145
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAaka 45 
                          s+++GV+ ++ +g+W ++++       +k+++lg +  +e+Aa a
  Bobra.0038s0078.1.p 107 SKFPGVSVHRATGKWIVQLQTR-----YKNYYLGLYEKEEDAAHA 146
                          79****************8882.....4**********8888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MMMFSIAARV GKGRNMYLPH PELKGVHSQT GGFSWRGGLK LSRKMFYTPT YRTAEEAASV  60
LAGMRYMIGR EGGKPFPSGE LEKLNGLVSF QDALALLHSR PLTRGKSKFP GVSVHRATGK  120
WIVQLQTRYK NYYLGLYEKE EDAAHAFVCG LMYMRMLSGT SRKGAPPTPG PQPGLGCRRM  180
CPLGFPWISG KCLQRKCIFL SMVHARKRRP GIQGITKQVK AVLLLP*