PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0038s0078.2.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family ERF
Protein Properties Length: 168aa    MW: 18875 Da    PI: 10.599
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0038s0078.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.67.3e-09107146145
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAaka 45 
                          s+++GV+ ++ +g+W ++++       +k+++lg +  +e+Aa a
  Bobra.0038s0078.2.p 107 SKFPGVSVHRATGKWIVQLQTR-----YKNYYLGLYEKEEDAAHA 146
                          79****************8882.....4**********8888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MMMFSIAARV GKGRNMYLPH PELKGVHSQT GGFSWRGGLK LSRKMFYTPT YRTAEEAASV  60
LAGMRYMIGR EGGKPFPSGE LEKLNGLVSF QDALALLHSR PLTRGKSKFP GVSVHRATGK  120
WIVQLQTRYK NYYLGLYEKE EDAAHAFVCG LMYMRMLSGT SRKDWKL*