PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0054s0058.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family GATA
Protein Properties Length: 226aa    MW: 24639.1 Da    PI: 10.0042
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0054s0058.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.21.7e-16108141134
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                          C nCg+ ++p+WRrgp   +tLCnaCG +yr+++
  Bobra.0054s0058.1.p 108 CDNCGARESPQWRRGPVEVPTLCNACGTRYRRTK 141
                          9******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MFGKNFDFFR EQDLDNDVAS SASSVTGKEK AWHVLVKQDT GDALEGTELE KLKAAVLALA  60
EAATGPVGGL VESLRMAAAR VATCSGRSPT PGSPPCVSLS LSKSGGPCDN CGARESPQWR  120
RGPVEVPTLC NACGTRYRRT KKLERFSESR QLCLMQKRSI SRRSPPQRRS TPRRPDPKIV  180
KIKMPGNLDA RTRCSLDGNV SLLNQDHRHP WPDAVSAWVR ELPVC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.13e-09GATA family protein