PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0077s0073.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family bHLH
Protein Properties Length: 404aa    MW: 41568.8 Da    PI: 6.7913
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0077s0073.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.3e-13122169355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          + h   E++RRd+iN++++eL++llP       +K++Ka  L +A eY ++Lq
  Bobra.0077s0073.1.p 122 QRHVVTEQKRRDKINEGYAELQQLLPCT-----EKVEKARLLMQAAEYTRQLQ 169
                          568999*********************8.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MGATRRVANY DSRAGWSRAG SSGGTEQRCS AATLQAETFG QVLLRPTRSY YSLKGLAIVI  60
LQLWGAPWSV ITMATTLEGA MAPPSSRGDS ASEGDLQAEM GDDEGQQARK SQKVCGTQVA  120
SQRHVVTEQK RRDKINEGYA ELQQLLPCTE KVEKARLLMQ AAEYTRQLQA AMQQLVDSDA  180
SSRLPDDLQY AIRKLLPPKQ GQGSTGGGTA GSSGLNPVDP QDPLALLAEH AQQAQDSEWA  240
EKAAAEAAAA AASQAAAPAS APPLAVPLVA GLLGQAPLLQ PLQANMQLIQ QLQLQALQGQ  300
VAGLPALAGA GLAGVPGLQS LLAAPALQSL LATNLAAGFQ PVVAPPAPAD PGNEGGTGEG  360
GPAPAKRKAA TKARQHSTSA KLAKEENSSP REDAGGRPGV QPT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67110.12e-10bHLH family protein