PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0077s0097.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

MYB_related

Protein Properties

Length: 1859aa MW: 195589 Da PI: 6.7856

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0077s0097.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.1	4.1e-08	290	338	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqky 47 r+rWT+eE++ l+ av +g+W+ + + ++ t+ q+k++w+++ Bobra.0077s0097.1.p 290 RMRWTEEEEDALYAAVLTCKKGNWAMMRHFSPllEKFTPLQLKDKWRNL 338 89***********************6666669888**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1859 aa Download sequence
MDQDVSLLRT KPEYDHYIAD NLSQLLGRKV GVKDLEVSSV LGYPPLFDFL PKEFWNGNRP 60 SAGSNTELNA SIKKYLIQLY PALSHTTRPC RTKLPRQPDD FGWLRLWKRL EVFPRLNSDF 120 YRIDKFGFVV CKDVGRGDPF AWAVDHFFPS SLGGLDVLPN LNIISEAVNY YKSNNRLDCF 180 LDISKVCGGV RASTLSLLLE EHGPAILDEP RDKFLSILEK SKEAFSAQIK DGGPNTTSSG 240 GGTGKAKGLD DVRGVPGPFL LTPRSTHIDV WPQHTRAGSM SAGDREVHRR MRWTEEEEDA 300 LYAAVLTCKK GNWAMMRHFS PLLEKFTPLQ LKDKWRNLEA RDERGVTPRT PRRRQSAQDD 360 QENRLLEPQN VLGSQARRNL TGPAKPGKHV LQHLAGRHAS QTPLTPRNVM PATPFEPTSH 420 SSMGQPSGPR RALAEVQVGS PPEHRLPAGP AGGTGRVAYL DHRPAPEAPG SLQRASAPSQ 480 RSLLDAPALR PRDPAPLSQS ADPQEPALWS PAPFTKTEPQ ETKENLSHAG GVLRGAAPTR 540 RVSFAEAEDG RKSSESAGEA AIQKHPQTLP GPAGLENHTA PSSRVSSASS VGNERSSGSR 600 PRTDPKSERV SWKPWESATR ASSTESGSTD GESEVELAQA FQGSHPSRGP APIEERAGDR 660 WAGSQKSLCT EAEAERSESR APRSLVPLLH LKIPQEQISL PALIAEDDHD QSEVVNFVTP 720 KAVQFPKEVQ FSKGVQYYKP AFRSAAARPS HRAASSGRKA PASSLLPPPG LTKAQVPPTV 780 STQDDPVPWG PGNVGTDSSH GWPAGSGVGW ASPVGTPPEG LQGRTRGLVN GRTGLVDGEQ 840 WSPRGSAKGS LEPLQCSTGF TDRGKLPHSS PDQSPKGSLG LWEPLHTAPN ESPENNLGWE 900 DSLHASPDQS PTVSPGREES LQAAPDDSLE DRLVQGKHLH AAPEEALEGG LSHRQHLCAT 960 PNEYPKNSLG PGVRVHPAPP DGSPKDSGGT EEPSGECVNR PAGKSGVGPQ EYFTADPDES 1020 GHCSAGATTA SANETVKGNL GEAGFIPEVY QPEAGGKEGP DSAVQVGEDK SLSETVEAVR 1080 LAAQEAAAAA ADAVRALQVV SDLRSKLQQL RHQKEAALQL VAANKQEAEL IGAAIQAAEA 1140 EIACQNAAAL ASAEARTNGR DRALELLRQL AQLAKAEPAE VFLDLAIAKV GPCGPYTHSP 1200 DSEAAPARAA APSVPPTVQC TAHQGARPTG GSCIVVPATT SPRNSQATAR GKENVPPVLA 1260 APVGKEANHK TTLRHSAPEF VPRALTPRLP VGSSPRLPVG SSPRLPGLSP RLLVPLSASS 1320 PGGSGGGSRA SPPSGIRSGP AASLPEPLIG PQGAQTPRVL MGRTAGPHGG TAPVGNQHLV 1380 ACSGPAHAAP AAEGPSRQPA AGPTPDCAHI PLPLTPIRFP GGREDSRPVC EDAVTGLGSP 1440 VVPDFPKMWS ASSATPSLKP RAVLPVGGGT TAGQVAVSSE TANASEDQSA AHSAVRSTDG 1500 GANNGNLGES ANVLVERRAA QSAIHGLVEG ATDGKAGADE GAGLGLRCQG LQASGSLSAS 1560 AVVEVPQAGG EGAGTAPVSQ GPNLVMDRGA AETGGAFVGI SPSLVRELFT GAPMQARGTT 1620 AARSPETLGL SKGLQDKPSE QMSRELSVPI ERLAGLTLSA EQKSPSATPE HLRPSGLCLK 1680 ITPLTGSPRR EHQDRGDTRQ NMGYPTHGSA GLDGDNEVRG RARLALDPQS ESSEVTESQG 1740 STGSEVWGKV REQEPSWDER EAKPLDGQST GGHVDVAVSS VGGAAEVLGL QQMFSEQRVL 1800 GAEGRLSRAN SSLNGDSIGL ATSALDANRN AIWRRIEQMR AHFDRIQTCM DQFSVDVL*

Sequence ? help Back to Top

Protein Sequence Length: 1859 aa Download sequence

MDQDVSLLRT KPEYDHYIAD NLSQLLGRKV GVKDLEVSSV LGYPPLFDFL PKEFWNGNRP  60
SAGSNTELNA SIKKYLIQLY PALSHTTRPC RTKLPRQPDD FGWLRLWKRL EVFPRLNSDF  120
YRIDKFGFVV CKDVGRGDPF AWAVDHFFPS SLGGLDVLPN LNIISEAVNY YKSNNRLDCF  180
LDISKVCGGV RASTLSLLLE EHGPAILDEP RDKFLSILEK SKEAFSAQIK DGGPNTTSSG  240
GGTGKAKGLD DVRGVPGPFL LTPRSTHIDV WPQHTRAGSM SAGDREVHRR MRWTEEEEDA  300
LYAAVLTCKK GNWAMMRHFS PLLEKFTPLQ LKDKWRNLEA RDERGVTPRT PRRRQSAQDD  360
QENRLLEPQN VLGSQARRNL TGPAKPGKHV LQHLAGRHAS QTPLTPRNVM PATPFEPTSH  420
SSMGQPSGPR RALAEVQVGS PPEHRLPAGP AGGTGRVAYL DHRPAPEAPG SLQRASAPSQ  480
RSLLDAPALR PRDPAPLSQS ADPQEPALWS PAPFTKTEPQ ETKENLSHAG GVLRGAAPTR  540
RVSFAEAEDG RKSSESAGEA AIQKHPQTLP GPAGLENHTA PSSRVSSASS VGNERSSGSR  600
PRTDPKSERV SWKPWESATR ASSTESGSTD GESEVELAQA FQGSHPSRGP APIEERAGDR  660
WAGSQKSLCT EAEAERSESR APRSLVPLLH LKIPQEQISL PALIAEDDHD QSEVVNFVTP  720
KAVQFPKEVQ FSKGVQYYKP AFRSAAARPS HRAASSGRKA PASSLLPPPG LTKAQVPPTV  780
STQDDPVPWG PGNVGTDSSH GWPAGSGVGW ASPVGTPPEG LQGRTRGLVN GRTGLVDGEQ  840
WSPRGSAKGS LEPLQCSTGF TDRGKLPHSS PDQSPKGSLG LWEPLHTAPN ESPENNLGWE  900
DSLHASPDQS PTVSPGREES LQAAPDDSLE DRLVQGKHLH AAPEEALEGG LSHRQHLCAT  960
PNEYPKNSLG PGVRVHPAPP DGSPKDSGGT EEPSGECVNR PAGKSGVGPQ EYFTADPDES  1020
GHCSAGATTA SANETVKGNL GEAGFIPEVY QPEAGGKEGP DSAVQVGEDK SLSETVEAVR  1080
LAAQEAAAAA ADAVRALQVV SDLRSKLQQL RHQKEAALQL VAANKQEAEL IGAAIQAAEA  1140
EIACQNAAAL ASAEARTNGR DRALELLRQL AQLAKAEPAE VFLDLAIAKV GPCGPYTHSP  1200
DSEAAPARAA APSVPPTVQC TAHQGARPTG GSCIVVPATT SPRNSQATAR GKENVPPVLA  1260
APVGKEANHK TTLRHSAPEF VPRALTPRLP VGSSPRLPVG SSPRLPGLSP RLLVPLSASS  1320
PGGSGGGSRA SPPSGIRSGP AASLPEPLIG PQGAQTPRVL MGRTAGPHGG TAPVGNQHLV  1380
ACSGPAHAAP AAEGPSRQPA AGPTPDCAHI PLPLTPIRFP GGREDSRPVC EDAVTGLGSP  1440
VVPDFPKMWS ASSATPSLKP RAVLPVGGGT TAGQVAVSSE TANASEDQSA AHSAVRSTDG  1500
GANNGNLGES ANVLVERRAA QSAIHGLVEG ATDGKAGADE GAGLGLRCQG LQASGSLSAS  1560
AVVEVPQAGG EGAGTAPVSQ GPNLVMDRGA AETGGAFVGI SPSLVRELFT GAPMQARGTT  1620
AARSPETLGL SKGLQDKPSE QMSRELSVPI ERLAGLTLSA EQKSPSATPE HLRPSGLCLK  1680
ITPLTGSPRR EHQDRGDTRQ NMGYPTHGSA GLDGDNEVRG RARLALDPQS ESSEVTESQG  1740
STGSEVWGKV REQEPSWDER EAKPLDGQST GGHVDVAVSS VGGAAEVLGL QQMFSEQRVL  1800
GAEGRLSRAN SSLNGDSIGL ATSALDANRN AIWRRIEQMR AHFDRIQTCM DQFSVDVL*