PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0077s0097.2.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

MYB_related

Protein Properties

Length: 1858aa MW: 195447 Da PI: 6.7856

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0077s0097.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.1	4.1e-08	289	337	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqky 47 r+rWT+eE++ l+ av +g+W+ + + ++ t+ q+k++w+++ Bobra.0077s0097.2.p 289 RMRWTEEEEDALYAAVLTCKKGNWAMMRHFSPllEKFTPLQLKDKWRNL 337 89***********************6666669888**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1858 aa Download sequence
MDQDVSLLRT KPEYDHYIAD NLSQLLGRKV GVKDLEVSSV LGYPPLFDFL PKEFWNGNRP 60 SAGSNTELNA SIKKYLIQLY PALSHTTRPC RTKLPRQPDD FGWLRLWKRL EVFPRLNSDF 120 YRIDKFGFVV CKDVGRGDPF AWAVDHFFPS SLGGLDVLPN LNIISEAVNY YKSNKLDCFL 180 DISKVCGGVR ASTLSLLLEE HGPAILDEPR DKFLSILEKS KEAFSAQIKD GGPNTTSSGG 240 GTGKAKGLDD VRGVPGPFLL TPRSTHIDVW PQHTRAGSMS AGDREVHRRM RWTEEEEDAL 300 YAAVLTCKKG NWAMMRHFSP LLEKFTPLQL KDKWRNLEAR DERGVTPRTP RRRQSAQDDQ 360 ENRLLEPQNV LGSQARRNLT GPAKPGKHVL QHLAGRHASQ TPLTPRNVMP ATPFEPTSHS 420 SMGQPSGPRR ALAEVQVGSP PEHRLPAGPA GGTGRVAYLD HRPAPEAPGS LQRASAPSQR 480 SLLDAPALRP RDPAPLSQSA DPQEPALWSP APFTKTEPQE TKENLSHAGG VLRGAAPTRR 540 VSFAEAEDGR KSSESAGEAA IQKHPQTLPG PAGLENHTAP SSRVSSASSV GNERSSGSRP 600 RTDPKSERVS WKPWESATRA SSTESGSTDG ESEVELAQAF QGSHPSRGPA PIEERAGDRW 660 AGSQKSLCTE AEAERSESRA PRSLVPLLHL KIPQEQISLP ALIAEDDHDQ SEVVNFVTPK 720 AVQFPKEVQF SKGVQYYKPA FRSAAARPSH RAASSGRKAP ASSLLPPPGL TKAQVPPTVS 780 TQDDPVPWGP GNVGTDSSHG WPAGSGVGWA SPVGTPPEGL QGRTRGLVNG RTGLVDGEQW 840 SPRGSAKGSL EPLQCSTGFT DRGKLPHSSP DQSPKGSLGL WEPLHTAPNE SPENNLGWED 900 SLHASPDQSP TVSPGREESL QAAPDDSLED RLVQGKHLHA APEEALEGGL SHRQHLCATP 960 NEYPKNSLGP GVRVHPAPPD GSPKDSGGTE EPSGECVNRP AGKSGVGPQE YFTADPDESG 1020 HCSAGATTAS ANETVKGNLG EAGFIPEVYQ PEAGGKEGPD SAVQVGEDKS LSETVEAVRL 1080 AAQEAAAAAA DAVRALQVVS DLRSKLQQLR HQKEAALQLV AANKQEAELI GAAIQAAEAE 1140 IACQNAAALA SAEARTNGRD RALELLRQLA QLAKAEPAEV FLDLAIAKVG PCGPYTHSPD 1200 SEAAPARAAA PSVPPTVQCT AHQGARPTGG SCIVVPATTS PRNSQATARG KENVPPVLAA 1260 PVGKEANHKT TLRHSAPEFV PRALTPRLPV GSSPRLPVGS SPRLPGLSPR LLVPLSASSP 1320 GGSGGGSRAS PPSGIRSGPA ASLPEPLIGP QGAQTPRVLM GRTAGPHGGT APVGNQHLVA 1380 CSGPAHAAPA AEGPSRQPAA GPTPDCAHIP LPLTPIRFPG GREDSRPVCE DAVTGLGSPV 1440 VPDFPKMWSA SSATPSLKPR AVLPVGGGTT AGQVAVSSET ANASEDQSAA HSAVRSTDGG 1500 ANNGNLGESA NVLVERRAAQ SAIHGLVEGA TDGKAGADEG AGLGLRCQGL QASGSLSASA 1560 VVEVPQAGGE GAGTAPVSQG PNLVMDRGAA ETGGAFVGIS PSLVRELFTG APMQARGTTA 1620 ARSPETLGLS KGLQDKPSEQ MSRELSVPIE RLAGLTLSAE QKSPSATPEH LRPSGLCLKI 1680 TPLTGSPRRE HQDRGDTRQN MGYPTHGSAG LDGDNEVRGR ARLALDPQSE SSEVTESQGS 1740 TGSEVWGKVR EQEPSWDERE AKPLDGQSTG GHVDVAVSSV GGAAEVLGLQ QMFSEQRVLG 1800 AEGRLSRANS SLNGDSIGLA TSALDANRNA IWRRIEQMRA HFDRIQTCMD QFSVDVL*

Sequence ? help Back to Top

Protein Sequence Length: 1858 aa Download sequence

MDQDVSLLRT KPEYDHYIAD NLSQLLGRKV GVKDLEVSSV LGYPPLFDFL PKEFWNGNRP  60
SAGSNTELNA SIKKYLIQLY PALSHTTRPC RTKLPRQPDD FGWLRLWKRL EVFPRLNSDF  120
YRIDKFGFVV CKDVGRGDPF AWAVDHFFPS SLGGLDVLPN LNIISEAVNY YKSNKLDCFL  180
DISKVCGGVR ASTLSLLLEE HGPAILDEPR DKFLSILEKS KEAFSAQIKD GGPNTTSSGG  240
GTGKAKGLDD VRGVPGPFLL TPRSTHIDVW PQHTRAGSMS AGDREVHRRM RWTEEEEDAL  300
YAAVLTCKKG NWAMMRHFSP LLEKFTPLQL KDKWRNLEAR DERGVTPRTP RRRQSAQDDQ  360
ENRLLEPQNV LGSQARRNLT GPAKPGKHVL QHLAGRHASQ TPLTPRNVMP ATPFEPTSHS  420
SMGQPSGPRR ALAEVQVGSP PEHRLPAGPA GGTGRVAYLD HRPAPEAPGS LQRASAPSQR  480
SLLDAPALRP RDPAPLSQSA DPQEPALWSP APFTKTEPQE TKENLSHAGG VLRGAAPTRR  540
VSFAEAEDGR KSSESAGEAA IQKHPQTLPG PAGLENHTAP SSRVSSASSV GNERSSGSRP  600
RTDPKSERVS WKPWESATRA SSTESGSTDG ESEVELAQAF QGSHPSRGPA PIEERAGDRW  660
AGSQKSLCTE AEAERSESRA PRSLVPLLHL KIPQEQISLP ALIAEDDHDQ SEVVNFVTPK  720
AVQFPKEVQF SKGVQYYKPA FRSAAARPSH RAASSGRKAP ASSLLPPPGL TKAQVPPTVS  780
TQDDPVPWGP GNVGTDSSHG WPAGSGVGWA SPVGTPPEGL QGRTRGLVNG RTGLVDGEQW  840
SPRGSAKGSL EPLQCSTGFT DRGKLPHSSP DQSPKGSLGL WEPLHTAPNE SPENNLGWED  900
SLHASPDQSP TVSPGREESL QAAPDDSLED RLVQGKHLHA APEEALEGGL SHRQHLCATP  960
NEYPKNSLGP GVRVHPAPPD GSPKDSGGTE EPSGECVNRP AGKSGVGPQE YFTADPDESG  1020
HCSAGATTAS ANETVKGNLG EAGFIPEVYQ PEAGGKEGPD SAVQVGEDKS LSETVEAVRL  1080
AAQEAAAAAA DAVRALQVVS DLRSKLQQLR HQKEAALQLV AANKQEAELI GAAIQAAEAE  1140
IACQNAAALA SAEARTNGRD RALELLRQLA QLAKAEPAEV FLDLAIAKVG PCGPYTHSPD  1200
SEAAPARAAA PSVPPTVQCT AHQGARPTGG SCIVVPATTS PRNSQATARG KENVPPVLAA  1260
PVGKEANHKT TLRHSAPEFV PRALTPRLPV GSSPRLPVGS SPRLPGLSPR LLVPLSASSP  1320
GGSGGGSRAS PPSGIRSGPA ASLPEPLIGP QGAQTPRVLM GRTAGPHGGT APVGNQHLVA  1380
CSGPAHAAPA AEGPSRQPAA GPTPDCAHIP LPLTPIRFPG GREDSRPVCE DAVTGLGSPV  1440
VPDFPKMWSA SSATPSLKPR AVLPVGGGTT AGQVAVSSET ANASEDQSAA HSAVRSTDGG  1500
ANNGNLGESA NVLVERRAAQ SAIHGLVEGA TDGKAGADEG AGLGLRCQGL QASGSLSASA  1560
VVEVPQAGGE GAGTAPVSQG PNLVMDRGAA ETGGAFVGIS PSLVRELFTG APMQARGTTA  1620
ARSPETLGLS KGLQDKPSEQ MSRELSVPIE RLAGLTLSAE QKSPSATPEH LRPSGLCLKI  1680
TPLTGSPRRE HQDRGDTRQN MGYPTHGSAG LDGDNEVRGR ARLALDPQSE SSEVTESQGS  1740
TGSEVWGKVR EQEPSWDERE AKPLDGQSTG GHVDVAVSSV GGAAEVLGLQ QMFSEQRVLG  1800
AEGRLSRANS SLNGDSIGLA TSALDANRNA IWRRIEQMRA HFDRIQTCMD QFSVDVL*