PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0078s0005.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family GATA
Protein Properties Length: 149aa    MW: 16322.3 Da    PI: 8.4872
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0078s0005.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.99e-163159129
                 GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGly 29
                         Cs C +tkTp+WR+gp g ktLCnaCG++
  Bobra.0078s0005.1.p 31 CSRCAATKTPMWRNGPAGAKTLCNACGVR 59
                         ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MSDAPVVPDS QQNNNEQQLE GEAASEQPKA CSRCAATKTP MWRNGPAGAK TLCNACGVRL  60
YRQTSKVPKK GEAGDNNDEV PVEGAAKLQY LDIVRRLKAA TNQEDVGRIE FEIRDKTELF  120
PRKCDRPSEE EGRGRIRASA ANQPPKRL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18380.11e-12GATA family protein