PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0095s0011.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family MYB
Protein Properties Length: 340aa    MW: 37318.8 Da    PI: 10.2538
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0095s0011.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.13.6e-1769113247
                          SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                           +W +eEde+l+ +v ++G + W+ Ia++++ gR +kqc++rw++ 
  Bobra.0095s0011.1.p  69 TAWLPEEDEKLASLVDRHGQRVWSYIAQHFP-GRIGKQCRERWNNQ 113
                          68*****************************.************96 PP
2Myb_DNA-binding56.94.7e-18120162145
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                          r++WT+eE+e+lv a++++G+  W+ Ia+++  gR+++++k++w+
  Bobra.0095s0011.1.p 120 RDAWTPEEEEQLVVAHQKMGNC-WAEIAKHIA-GRSENSVKNHWN 162
                          789*****************99.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MYSSTDLDGS DAQSDLSAFP CTSLTVQKEK DGSHATSTFR GRSADSNCSE ETKYVSKKKR  60
RHLLAKIKTA WLPEEDEKLA SLVDRHGQRV WSYIAQHFPG RIGKQCRERW NNQLRPGIRR  120
DAWTPEEEEQ LVVAHQKMGN CWAEIAKHIA GRSENSVKNH WNATCRRSDT VSGKSNTSPL  180
KEYIRSLGIA GRKKHCGKRG RSTAASPASA RSTPCKSSTP PRSKRARSQS FEEQTIGRSS  240
SLDSSATTLR KSRSRSFQST QCLDHLACHE VLGDEGETAA VPSHEGGLPT AGGVGPPARA  300
ARLDDVQQPH LLAGQPGPLQ LRLRDAFRLV PPPLVHGGW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15761KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27785.15e-41MYB family protein