PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0132s0102.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

G2-like

Protein Properties

Length: 410aa MW: 43369.1 Da PI: 9.9923

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0132s0102.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	81.9	7e-26	208	260	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +r++Wt+eLH++F++av ++ G ++A+Pk+i+++m+v+ Lt+e+v+SHLQkYRl Bobra.0132s0102.1.p 208 ARMVWTSELHQKFLDAVLKI-GVDQAVPKKIMQAMGVDYLTRENVASHLQKYRL 260 7*****************.******************************8 PP
2	Myb_DNA-binding	40.2	7.8e-13	209	259	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT e++++++dav + G + +k+I++ mg +t++++ s++qky+ Bobra.0132s0102.1.p 209 RMVWTSELHQKFLDAVLKIGVDqaVPKKIMQAMGvDYLTRENVASHLQKYR 259 789******************************999**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MGKEAVATAG AGICEQAAVA LSELPELPNP NACILPPEML AKAFAVPPPR RLDVPAYHQG 60 WPNYMDSLLL QQIQAANAYQ TSTLLPLGAG LGPPAYPSYP YVGPWLGMRD PAQIPLPPPH 120 SYPYLALAGA PQLPCQWNQR LSEKANVLAG RVPVSQAAPG WTGYPGALPF PQGAACDMRG 180 ATMQGLEFNG SGVANGQRRD GNQPVQRARM VWTSELHQKF LDAVLKIGVD QAVPKKIMQA 240 MGVDYLTREN VASHLQKYRL QLKREQENKG RTSTSRATPS CSATAPAGKT ATGARGVRSA 300 GPKGPSAREE TASPSMPKFQ PLAARPTPPA ERREQPVELQ DTAASFRHAP VKMAGGTSGK 360 RGSGSSEDSP GSNTPLGEDK SGSRELASGS RSPQSGSSRT MIQQRKATE*

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MGKEAVATAG AGICEQAAVA LSELPELPNP NACILPPEML AKAFAVPPPR RLDVPAYHQG  60
WPNYMDSLLL QQIQAANAYQ TSTLLPLGAG LGPPAYPSYP YVGPWLGMRD PAQIPLPPPH  120
SYPYLALAGA PQLPCQWNQR LSEKANVLAG RVPVSQAAPG WTGYPGALPF PQGAACDMRG  180
ATMQGLEFNG SGVANGQRRD GNQPVQRARM VWTSELHQKF LDAVLKIGVD QAVPKKIMQA  240
MGVDYLTREN VASHLQKYRL QLKREQENKG RTSTSRATPS CSATAPAGKT ATGARGVRSA  300
GPKGPSAREE TASPSMPKFQ PLAARPTPPA ERREQPVELQ DTAASFRHAP VKMAGGTSGK  360
RGSGSSEDSP GSNTPLGEDK SGSRELASGS RSPQSGSSRT MIQQRKATE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10760.1	5e-22	G2-like family protein