PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0141s0053.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family bHLH
Protein Properties Length: 912aa    MW: 96170.4 Da    PI: 7.6249
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0141s0053.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.8e-0963108251
                          HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS
                  HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 
                          r+++ + E+ RRdri ++++ Lre+lP      + K++  + L++A +YI
  Bobra.0141s0053.1.p  63 RAKNRKTEQERRDRIHEGLQALREVLPLV----HSKMDQQQLLRHAARYI 108
                          88999***********************7....79*************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 912 aa     Download sequence    
MGISEEGGQE AAEEHRRTEE TQTKAGEEGS LEADVNVRKA RKRRAGNLAP ESKERDSWRE  60
QARAKNRKTE QERRDRIHEG LQALREVLPL VHSKMDQQQL LRHAARYITA TKSLLHQAQA  120
LGAMAGWPEP QQAAVSRLLS QDSYPADGLG QGVRSTAISL QGPPSLGSEG HSSPSKGTKG  180
LLASGQDMEK LTLPLAAVAL KGQLPGGLEG SSTSGTSGTA NTRSLEGNTS SAGLQELTAV  240
RLGLRCPGSL DGARPLGDPG PRFLPGDPSM ATSGHGSEAL QPMQIDSPSR LPEFMSCMEA  300
RDPSVGTGGG SPQLGTAART QSQSLPPGIP RTPFGEGTVR DIASSPQPDF RSRSMSQPSE  360
YEAILRSGGT GSKPTFLTSQ PRKSRLASRG SVPVHLPSTG RPAPPLLQRA PSWGPPAVPS  420
ERWGLWETSA PMPLPDPGFS AFNMAQPQET LQALAAGGTT APHLSILGGG PSEYEKPHQL  480
PVMGTGQGPG GPIGARPGSP IPQMPEQPPW TPPRAPDSVL QFSPWQGLGT MQYMYSPPLA  540
GVPQQSPGQQ QQGGSFVQQV GDMNVNPQGY IMHLHPPTSQ QAPQGFPYPA YGFSLPTSPM  600
GTAPAHPYVG PPGSLLTYSA VLPGQASGYA VYSPDQAMGS TGTVGGIPAP EGYPGFRGGQ  660
GISTAYATGQ AYNLQGQEAL RGQLQYAPGP PQQRMQYSGG TSSAQQDMLM QQQMSYQMQP  720
GFGGGGVAGG MVQYMQPGVQ YMQPGAQASA VPGFPSQMQE GRYGGRIGQG IPRVTSGIML  780
PPGPPEEHLP QSRRRGRRQE GRLSSEGAEV GAPHLEPPLE EMTGGIPHQV REQDSFPQSM  840
LHILHAPGSP RMGGAGGQSP VGDRFPLPNL SGDSFLPEGW HREGHLSNSF LPDLPPDPRD  900
QQAESRRRSF G*