PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0144s0036.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family NF-YC
Protein Properties Length: 191aa    MW: 20546.8 Da    PI: 4.4406
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0144s0036.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC42.31.6e-136504993
                NF-YC 49 kacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93
                         +a elfi +ltlr+   ae+ krrtl+k+di++a++ td fdfl 
  Bobra.0144s0036.1.p  6 QASELFISDLTLRALGIAESYKRRTLQKNDIDEAINTTDLFDFLE 50
                         699****************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MVSGKQASEL FISDLTLRAL GIAESYKRRT LQKNDIDEAI NTTDLFDFLE LRRFSLQVDI  60
VTSDNPASAP GVEGAPNGAR ETLQCPGQMS TIATMQNMND TIGMAGIDNV VNRGLLKRIL  120
GNEVSASGSY LNTLECFGTA HVLPFPFHDV GAHLNETNLR HDPQHVDDGH AMPDSSPQVD  180
VHDGDGQGTE *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12834RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.13e-12NF-YC family protein