PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0155s0013.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family B3
Protein Properties Length: 382aa    MW: 42095.6 Da    PI: 9.9339
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0155s0013.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.33.5e-1051147198
                          EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldg 86 
                          f k+  + +v  +  l+lp +f++++   ++   +++  ++de+g+++ev ++ r+++++  y+l   WkeF+ ++ +++ D ++++++ 
  Bobra.0155s0013.1.p  51 FTKKIPQTSVAPTYKLTLPSDFINQYarHLV---DQDFDMYDENGKKFEVSIQPRRNKDKyeYTLY-KWKEFAVEHCVQQEDKLTIEFTA 136
                          778888889999999***********65433...458***************88777777779999.8*******************866 PP

                          SSEE..EEEEE- CS
                   B3  87 rsefelvvkvfr 98 
                           + f+l+  + r
  Bobra.0155s0013.1.p 137 -DMFTLKAYITR 147
                          .66667766655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
MEALEHTVRR EEISTTRVLH TISGPHMQTV HQMSSIRGSY SGGGSASYPH FTKKIPQTSV  60
APTYKLTLPS DFINQYARHL VDQDFDMYDE NGKKFEVSIQ PRRNKDKYEY TLYKWKEFAV  120
EHCVQQEDKL TIEFTADMFT LKAYITRKGA GRDRVYHHSM GPAAHPNLSL PINVGHRVYH  180
GMSSPQGASM STQQDDGSPA SVRTGPPAIL HHNMDQSEIS FPERASHMHH PVSWLQGVYM  240
RQPMAHVPPV PLSSRSSFTP NLFQTAGSGG VTSVGGAFQP LTSPPRLLNG ASYRHLLESG  300
RDLVGPRRCA RSPQGGPPEV LRVIMMGAPR GATGGAARTN LIPPTPAMTG RDGLPLTTLG  360
SGRQCHVGGR HRQWRATCYP Q*