PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0192s0011.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family NF-YB
Protein Properties Length: 249aa    MW: 25757.2 Da    PI: 6.2916
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0192s0011.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB42.81.3e-13541262496
                NF-YB  24 nakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                          + +iskda     e +  fis++t+ a+d+c r kr+ti++dd++ al +  f + v pl+  l+ ++   +e
  Bobra.0192s0011.1.p  54 EIQISKDALLACSESAKVFISYLTATANDNCIRAKRQTISADDVIAALNDTDFTELVGPLRESLEAFKVESKE 126
                          5689**********************************************************99999865554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MQPANGPAAV GSGLQGKTDE PDLPKALVKK ILKAKLASLD QEKKLGGSRK PTGEIQISKD  60
ALLACSESAK VFISYLTATA NDNCIRAKRQ TISADDVIAA LNDTDFTELV GPLRESLEAF  120
KVESKEKNKA KAEQLKKRKL EKEEANRAAE DGADGFAEAG EGFFPSSSAG QLNQGSPAVP  180
LLTNSSRPLS ASTLGSPGLL LAPGVGSLGL SPGVFGAIDN LPHHMLDSPD LLPLGRTVHA  240
PGSPGDLV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.17e-22NF-YB family protein