PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0216s0041.3.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family YABBY
Protein Properties Length: 205aa    MW: 22030.6 Da    PI: 4.7749
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0216s0041.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY21.28.6e-076394112143
                YABBY 112 vppvirPPekrqrvPsaynrfikeeiqrikas 143
                          ++++   Pekr r Psa+n +ik  ++ +k +
  Bobra.0216s0041.3.p  63 AKQAKPRPEKRTRKPSAFNYYIKKTVEDLKKQ 94 
                          3444445*****************99998865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MSVADWAPFL RFAGSEIKEL CNHLASAAEQ FASTGGLPES KFGGENLILP ANGEAGKDVG  60
TNAKQAKPRP EKRTRKPSAF NYYIKKTVED LKKQGIKPKE GEGEGGQKES YLTLAVDKWN  120
TLSEIQRKEY IESHKHEFDD VPTQEDAGLL TPVEEAPPAL QVVVEEPANG AQVAEIESAV  180
SSIVSTQQSP TVSLQTCPHA EPGS*