PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0226s0048.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family bHLH
Protein Properties Length: 332aa    MW: 36248.1 Da    PI: 5.31
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0226s0048.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.74.3e-13125182255
                          HHHHHHHHHHHHHHHHHHHHHHHCTSCCC.......TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   2 rrahnerErrRRdriNsafeeLrellPkas....kapskKlsKaeiLekAveYIksLq 55 
                          +++h+ +E++RRdriNs ++eLr+l+P +      +   K  K  +L  ++  +k+Lq
  Bobra.0226s0048.1.p 125 KESHSTVEKQRRDRINSLIDELRDLVPAQNagvaVNEEVKRPKHVVLSDTIALVKELQ 182
                          789*************************666999666666777777777777766666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MAGQALQTEF DYHFTEKELT DLLQYIQSDP PEKLTSLPVP SFFPESGNPP SLSLQFHPHP  60
PLVLGIPANS SPGLVADQAP LSLYTSAADL PGTITPPPDS TVGIGLSRTP PLNANTKKGD  120
HKSSKESHST VEKQRRDRIN SLIDELRDLV PAQNAGVAVN EEVKRPKHVV LSDTIALVKE  180
LQGKAKSEDT GKAESQEQQS ENRNKADVLV KSEEVSADAP QDFKQLGSEK LLEGVTIEED  240
GGVNRHLRLR VVCKDRRGLL LDLIAVLKPL PVQIIGASVR TMSDGLVHDV FSVEVDTEHE  300
ERKQEVKCQM LEKLKGLIGE GEPNEKRLKV I*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09820.13e-07bHLH family protein