PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0228s0009.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family B3
Protein Properties Length: 232aa    MW: 26291.8 Da    PI: 5.7954
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0228s0009.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.41.1e-121261893697
                          EEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                   B3  36 ltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                          ++l d++g +W+++++   +k+++++ l++GW+ F   +g++ gD +vF++ g+++f+l++++ 
  Bobra.0228s0009.1.p 126 VVLVDKNGYEWDMTYQCyaWKGRRHFELRTGWNLFTAIHGVEIGDAIVFERWGQDRFKLRIRIE 189
                          899************6669*******************************87779999998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MGQSSSRSLE AWQEGAAQIL KGAQAILAAQ AADPPSTLRR QRERLNPFFM ELVAKLLLDD  60
QAEGDAPLVS VKRTIKNPKC LGCLGFKKGM VEDLLPPGPG SAADPVTDDD IVEPTDEYRV  120
LFEHYVVLVD KNGYEWDMTY QCYAWKGRRH FELRTGWNLF TAIHGVEIGD AIVFERWGQD  180
RFKLRIRIEK AEGKSDKPLR GPEEEEEKDL PEDEPHDQVT SVQKKKKRRK N*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1223229QKKKKRR
2224229KKKKRR
3224230KKKKRRK
4224231KKKKRRKN
5225230KKKKRR
6225230KKKRRK
7226230KKRRK