PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0228s0009.3.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family B3
Protein Properties Length: 195aa    MW: 22329.5 Da    PI: 5.4392
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0228s0009.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.87.8e-13891523697
                          EEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                   B3  36 ltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                          ++l d++g +W+++++   +k+++++ l++GW+ F   +g++ gD +vF++ g+++f+l++++ 
  Bobra.0228s0009.3.p  89 VVLVDKNGYEWDMTYQCyaWKGRRHFELRTGWNLFTAIHGVEIGDAIVFERWGQDRFKLRIRIE 152
                          899************6669*******************************87779999998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MAVGLQRLNP FFMELVAKLL LDDQAEGDAP LVSVKRTIKN PKCLGCLGFK KGMVEDLLPP  60
GPGSAADPVT DDDIVEPTDE YRVLFEHYVV LVDKNGYEWD MTYQCYAWKG RRHFELRTGW  120
NLFTAIHGVE IGDAIVFERW GQDRFKLRIR IEKAEGKSDK PLRGPEEEEE KDLPEDEPHD  180
QVTSVQKKKK RRKN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186192QKKKKRR
2187192KKKKRR
3187193KKKKRRK
4187194KKKKRRKN
5188193KKKKRR
6188193KKKRRK
7189193KKRRK