PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0229s0013.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family GATA
Protein Properties Length: 219aa    MW: 24954.2 Da    PI: 10.813
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0229s0013.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA40.44e-13151183133
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 
                          Cs C++ ++p+WR+gp  ++ LCnaCG ++ +k
  Bobra.0229s0013.1.p 151 CSYCKAADSPQWRKGPADQPVLCNACGTRWLRK 183
                          9***************88888*********665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MHADNHGYWY GGSFRDGSGL LTLWRAVHIM GHWDADLQPS TREPRVPQPW ETPTRRVNAV  60
QGRAGTQSAT PLARGYPVDV EQGRREPRYK RRLVFPPEWH QSYYHDGGAA RPRMPSRKQG  120
EAAHALPERG QSLEHVPLPR PRKRQELHGP CSYCKAADSP QWRKGPADQP VLCNACGTRW  180
LRKNKLEKVM KKVIEKAPRC STRRPRRTDE SGSLSESR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.11e-10GATA family protein