PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0236s0026.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family B3
Protein Properties Length: 260aa    MW: 27345.2 Da    PI: 5.1282
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0236s0026.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.71.8e-1226933499
                         SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                   B3 34 ktltledesgrsWevkl..iyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99
                          ++ l de   +W+v++   y+ k+++y lt+GW  F k +++ +gD+vv+ + ++ ++ ++v++++r+
  Bobra.0236s0026.1.p 26 HEVNLVDEAQYTWKVQYegFYSAKQRHYRLTTGWTAFIKMKRVVVGDTVVIDR-WTeDRLNFVIHIIRS 93
                         5899*************6556999999*************************6.444999999999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MADDLFPPRP PENGSVNDGY APIFKHEVNL VDEAQYTWKV QYEGFYSAKQ RHYRLTTGWT  60
AFIKMKRVVV GDTVVIDRWT EDRLNFVIHI IRSSMAIPAS ISPSGGSSAP TERRARQIAA  120
PPITGGSAHS AGGVTAEKTP TPSRGDTGSG RGHSVSQVSG PQLSGPHEVP LQVSHAGPPP  180
SAPEGAMPEE AMREEARLAD PHFQSASTSS VGQAPTPAEG QQSPAEEEAA TIDMPTGESN  240
SPIKPPDLEA DGAAPTAPP*