PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0240s0006.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family B3
Protein Properties Length: 273aa    MW: 30653.6 Da    PI: 7.0505
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0240s0006.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.31.8e-101692303897
                          EEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                   B3  38 ledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                          + de+ +s++vk+    +k+++++vlt GW    k ng+ +gD++v+++ g+++fel+++v 
  Bobra.0240s0006.1.p 169 FLDEDEQSYDVKYECftWKGRRHFVLTVGWDMITKCNGVVVGDSIVLERWGEDRFELRFRVE 230
                          67999********6569*******************************8888***9999885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MVQSSSLSGP KLHEKAAQVL QASQAAQAAH DSTSLRRSRR VSNGSPAGAR PQEKENDPKE  60
LFILFLEKMQ AERSQQKATG TSLISSSWMN PPQPPRFFVK PPRPIGAPLV SITRTIKNPK  120
CLTRLGLKKG MVEDLLPPGP GSAADPVTDD DVLEPTDEYR VLFHHYLGFL DEDEQSYDVK  180
YECFTWKGRR HFVLTVGWDM ITKCNGVVVG DSIVLERWGE DRFELRFRVE KAEGNSDKPS  240
PGPEEVEEKD LPEDEPQDQV TSDQKRKKRR KT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1264270QKRKKRR
2265271KRKKRRK
3267271KKRRK