PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0266s0005.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family ERF
Protein Properties Length: 171aa    MW: 19048.8 Da    PI: 10.6727
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0266s0005.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.44.2e-1470124156
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkklege 56 
                          ++++GVr+++  g + AeIrd        k+ ++++g+f   e+Aaka+++ +++++ge
  Bobra.0266s0005.1.p  70 TDFRGVRQRP-AGNFSAEIRDS---RlevKNNKIWIGTFEKVEDAAKAYDKKALEINGE 124
                          579*******.8*********4...3555569***********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MKGIFTALMI FVIILPTPPV YEAGPSANNW LNVMDVTDSS VTPDVPEKRK RQRKSPKKAN  60
AKQTKFSPTT DFRGVRQRPA GNFSAEIRDS RLEVKNNKIW IGTFEKVEDA AKAYDKKALE  120
INGEHAILNF LPDGTRNPNS KSANRVFGTD SKYYNKANIH VVVGGLRGKW *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14853KRKRQR
24858KRKRQRKSPKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.14e-17ERF family protein