PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0309s0001.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

G2-like

Protein Properties

Length: 400aa MW: 42594.4 Da PI: 6.5051

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0309s0001.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	73.4	3.1e-23	160	213	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt eL rF +av++L G ++A Pk+il++m+v+gLt+e+v+S LQkYRl Bobra.0309s0001.1.p 160 KQRMVWTVELDGRFCDAVSKL-GVKNALPKSILQIMNVEGLTREQVASRLQKYRL 213 79*****************.9*****************************8 PP
2	Myb_DNA-binding	38.7	2.2e-12	162	212	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT e+d ++ dav +lG + +k+I + m+ +g+t++q+ sr+qky+ Bobra.0309s0001.1.p 162 RMVWTVELDGRFCDAVSKLGVKnaLPKSILQIMNvEGLTREQVASRLQKYR 212 789*****************999***********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MARQLETKPV QGSVGPQGPT EEAVKASIAG TAFNRQDVKP GRSCGGGPTM SPLPGCMLQA 60 NKAGDGRRGV LDASDILVDM RNASQNDHHQ TRSLPGDGCE GVGTSGPNPQ DSGSGRQSAD 120 GDCSSRRKRP TSGSDCGGDE GSSLCTDSSA GGQQQTPVKK QRMVWTVELD GRFCDAVSKL 180 GVKNALPKSI LQIMNVEGLT REQVASRLQK YRLNLKRYAE YTGNDPEDLH LQNRYNQEKS 240 IRENLGLFRS VIPPPPALNL QLAPPLPLLP NSSVVWGFPV HGIFPGPDNS YIGFPTMLPG 300 VGGSHQAYKS PGHPALPQDQ RLFDGFSYPM QPPWAFLPKL EQCTNPRHGL SGDCSTDTCA 360 DTSVSQQALD TGKAPAQEAE EGIPSIDDTE THSPRKDGS*

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MARQLETKPV QGSVGPQGPT EEAVKASIAG TAFNRQDVKP GRSCGGGPTM SPLPGCMLQA  60
NKAGDGRRGV LDASDILVDM RNASQNDHHQ TRSLPGDGCE GVGTSGPNPQ DSGSGRQSAD  120
GDCSSRRKRP TSGSDCGGDE GSSLCTDSSA GGQQQTPVKK QRMVWTVELD GRFCDAVSKL  180
GVKNALPKSI LQIMNVEGLT REQVASRLQK YRLNLKRYAE YTGNDPEDLH LQNRYNQEKS  240
IRENLGLFRS VIPPPPALNL QLAPPLPLLP NSSVVWGFPV HGIFPGPDNS YIGFPTMLPG  300
VGGSHQAYKS PGHPALPQDQ RLFDGFSYPM QPPWAFLPKL EQCTNPRHGL SGDCSTDTCA  360
DTSVSQQALD TGKAPAQEAE EGIPSIDDTE THSPRKDGS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46640.2	1e-22	G2-like family protein