PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0355s0007.3.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family GATA
Protein Properties Length: 517aa    MW: 56140.6 Da    PI: 6.5483
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0355s0007.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.91.8e-15351383133
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 
                          C +C++ kTp+WR gp g+ tLCnaCG+++ k 
  Bobra.0355s0007.3.p 351 CIQCNAHKTPQWRTGPAGPATLCNACGVRFHKG 383
                          89***************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    
MDAYHSQTGG RSRMPSIFET LYPGISSSQA QGINSTCQVP EAYKAEVLGP AGACFGGHEA  60
LDMANNDLIP DSLLVYGEQQ EIGGAQAWRI STQQDAQPSY PPMLEQVSAQ NGCLDGWRPV  120
RECIAPVPLS PVSDAKCLLS IRDETVYPAS PGYHQGTGQD HQSIFTSENN FTATINVAFN  180
SHTPQYLGHG QFPQMSPEYQ GFLSEEHGCG QPDLYLAEPQ YPELPRLELV VETRQLEMYH  240
SRQDPFQAQS IQDEFLDDMI AGDIDKFLKE CTRPADDVHV FHVEAGNPMH AEPASRAGSA  300
HQADGGQQRG RRPRFQNLSS TNPKSQPKNR AKGNNSSKSG GARRVGSSRR CIQCNAHKTP  360
QWRTGPAGPA TLCNACGVRF HKGQPFKDPP ARRRDKGPSK ELSDHSATTA RPKKPPNGEM  420
GPMESAPCAM HVASSFEKGP LNDVSTTKCI FSTVTPQSLP LHQLREAGDL VEVGRKETTP  480
PSNQQPTALP CCPSDPLTLN KPSVLQVEPT ICVPAQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.18e-12GATA family protein