PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0367s0010.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family HB-other
Protein Properties Length: 410aa    MW: 44730.9 Da    PI: 7.2223
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0367s0010.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox18.24.4e-06315371355
                          --SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
             Homeobox   3 kRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                          kR +ft+eql  L++l +    + + +++e+r +  +k ++t ++  ++F Nr+ ke
  Bobra.0367s0010.1.p 315 KRKRFTDEQLAGLQKLAQdnnwSLPSVTKEDRDKFCEKFQITRDRLHNFFNNRKPKE 371
                          899***************66555799****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MANQQNSGAN INALAAMLTG NRADGASLPT DAIAQLLAAH AQGADLQNIL SAKHNNEVEY  60
LQRAQERPSQ GNFLSGYQNA PMNDYVDTSN KQQHISQQHQ QQYMAQSNNL QGHAQNAMHL  120
QASQRGDVSQ DPKRFEDRAE HMSLPDLFHP GMQNSMQRRA PAEAAMDAMM PRMANGNLKL  180
QDPLRSCFDV AIALFADVTN LVTVVKAHCD SENSLIQDGH MDKYIGDTFA HLQKLCEIVG  240
YNLPLGSVGR PMQYKASPLI PPAGGLLRIP PTGHHFGPAV LPNVLTSPNR PVSAGPMQGP  300
LGAEGQDGAN TEGNKRKRFT DEQLAGLQKL AQDNNWSLPS VTKEDRDKFC EKFQITRDRL  360
HNFFNNRKPK EMKKPRTPVN PRPVGATSGE FTDANGNANE SQSASDNAS*