PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0380s0016.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

HSF

Protein Properties

Length: 457aa MW: 50488.3 Da PI: 5.1609

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0380s0016.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.6	1.3e-35	29	120	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 Fl+k+ye+++d++++++isw +ng+sfvv+++ efa+++Lp++Fkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F +g+k Bobra.0380s0016.1.p 29 FLNKTYELVDDPATDHIISWWSNGHSFVVWKPAEFARDLLPQHFKHNNFSSFVRQLNTYGFRKTDPDR---------WEFANEGFVRGHK 109 9*************************************************************9999.........********* PP XXXXXXXXXXX CS HSF_DNA-bind 92 ellekikrkks 102 ell++i+r+k+ Bobra.0380s0016.1.p 110 ELLKDIHRRKT 120 *******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MTATRRSSGF PQPAPPPPPA QSIAGPPPFL NKTYELVDDP ATDHIISWWS NGHSFVVWKP 60 AEFARDLLPQ HFKHNNFSSF VRQLNTYGFR KTDPDRWEFA NEGFVRGHKE LLKDIHRRKT 120 GNSQSSGNTL ANVAGPAIEV GSFGGLVDEV DGLKRDKHVL MLELVRLRQQ QQAADLEIRK 180 LQKKLEQTDD RQQQMMAFLA KVVQNPSFLQ QVLAARQPSQ QRITDMTGSR KKRRAARAHD 240 GGSDPETPPE DPTMQLVQYQ PQQNDFTKPF LNLLQREGNP YISLPGDGKG PDFDVDTAFN 300 SLNIRTNPAN NVTITEDLPQ PSSLVYHGMP AIPPSPLHTP LDPVDEHGNG NSLMIGPPAH 360 GGTGDVDLGS SAGPSDAHLF SQGLEPLQPA SDSLDFLPDI LAMRSGDLGL TDDALTDDFW 420 QDVLHAPDTQ DHPLDSDFFV EPAEYPHLKA DPDMPR*

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MTATRRSSGF PQPAPPPPPA QSIAGPPPFL NKTYELVDDP ATDHIISWWS NGHSFVVWKP  60
AEFARDLLPQ HFKHNNFSSF VRQLNTYGFR KTDPDRWEFA NEGFVRGHKE LLKDIHRRKT  120
GNSQSSGNTL ANVAGPAIEV GSFGGLVDEV DGLKRDKHVL MLELVRLRQQ QQAADLEIRK  180
LQKKLEQTDD RQQQMMAFLA KVVQNPSFLQ QVLAARQPSQ QRITDMTGSR KKRRAARAHD  240
GGSDPETPPE DPTMQLVQYQ PQQNDFTKPF LNLLQREGNP YISLPGDGKG PDFDVDTAFN  300
SLNIRTNPAN NVTITEDLPQ PSSLVYHGMP AIPPSPLHTP LDPVDEHGNG NSLMIGPPAH  360
GGTGDVDLGS SAGPSDAHLF SQGLEPLQPA SDSLDFLPDI LAMRSGDLGL TDDALTDDFW  420
QDVLHAPDTQ DHPLDSDFFV EPAEYPHLKA DPDMPR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	2e-78	HSF family protein