PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0385s0001.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family C3H
Protein Properties Length: 178aa    MW: 19472.1 Da    PI: 9.0115
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0385s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH30.75.2e-103056127
                         --S---SGGGGTS--TTTTT-SS-SSS CS
              zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHgp 27
                         yktelCrf+   G C +Gd+C++aHg+
  Bobra.0385s0001.1.p 30 YKTELCRFHGTIGGCGRGDKCTYAHGE 56
                         9************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MNRRRRSSVC PSPYADTSSR LPGPDITPRY KTELCRFHGT IGGCGRGDKC TYAHGERELR  60
SPSERSARHT STDSSPGSLH ATGSGVLYRG SPVQACPSSR RVQTYYLLPR TLCARRCMHS  120
YQAGRHPLPT TGCVLVGMNT YGLPALQKVS RLHDPAHEED MTCVGDSLCA FIFELVI*