PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0385s0001.2.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family C3H
Protein Properties Length: 177aa    MW: 19315.9 Da    PI: 8.853
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0385s0001.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH30.75.2e-102955127
                         --S---SGGGGTS--TTTTT-SS-SSS CS
              zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHgp 27
                         yktelCrf+   G C +Gd+C++aHg+
  Bobra.0385s0001.2.p 29 YKTELCRFHGTIGGCGRGDKCTYAHGE 55
                         9************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MNRRRSSVCP SPYADTSSRL PGPDITPRYK TELCRFHGTI GGCGRGDKCT YAHGERELRS  60
PSERSARHTS TDSSPGSLHA TGSGVLYRGS PVQACPSSRR VQTYYLLPRT LCARRCMHSY  120
QAGRHPLPTT GCVLVGMNTY GLPALQKVSR LHDPAHEEDM TCVGDSLCAF IFELVI*